PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A06G0972
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 328aa    MW: 36006.8 Da    PI: 4.3581
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A06G0972genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.22.4e-15161217359
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                   lkr rrk +NRe+ArrsR+RK+++++eLe  +++L +eN++L k+l +  +++  +
  Gh_A06G0972 161 HLKRLRRKLSNRESARRSRKRKQEQLAELEFQAEQLRGENDSLCKQLTNAHQLIRDV 217
                  58******************************************9999988887665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.6E-11158210No hitNo description
SMARTSM003381.1E-12159223IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.864161207IPR004827Basic-leucine zipper domain
PfamPF001702.5E-12161214IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-10162213No hitNo description
CDDcd147026.38E-18164212No hitNo description
PROSITE patternPS000360166181IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MKRSASELAL EEFSRNTLST TTIAAPSAFP DFALHPPIAH LSNSFHFTEF PRDAAEFSPQ  60
THVLLSQTLT SHLDSQSSFC GNESWGSTVC EGNNSNYRSR ENEVRGATTP SSDHDQSDDD  120
DDDVEEEDDD DDDEDEEGGE GEGEVEEADA GQSEQSLDPS HLKRLRRKLS NRESARRSRK  180
RKQEQLAELE FQAEQLRGEN DSLCKQLTNA HQLIRDVGTN NRVLTSNVQA LRHKVKLAED  240
MLAGGSFTCG LNQLVQSHLT SQQPIATNNH NLGRVVNVSP TITVQGDSSS YAGFTDMGNS  300
PNLGLPTLDF TNSNQNNIGI GGDAMSWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161168LKRLRRKL
2165181RRKLSNRESARRSRKRK
3175181RRSRKRK
4175182RRSRKRKQ
5177182SRKRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.57550.0boll| ovule
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX9641831e-118JX964183.1 Gossypium hirsutum clone NBRI_TRANS-452 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012451878.10.0PREDICTED: basic leucine zipper 9
TrEMBLA0A0D2R6T70.0A0A0D2R6T7_G
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM63702641
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.14e-38basic leucine zipper 9